Education
2015 - 2016
2015 - 2016Post Doctorate
Ohio State University, College Of Medicine, Biomedical Informatics, United States Of America
2007 - 2013
2007 - 2013Doctorate
Izmir Institute Of Technology, Fen Bilimleri Enstitüsü, Elektrik-Elektronik Mühendisliği Bölümü, Elektronik Ve Haberleşme Programı, Turkey
1997 - 2002
1997 - 2002Undergraduate
Ege University, Faculty Of Engineering, Bilgisayar Mühendisliği Bölümü, Turkey
Research Areas
Biomedical Engineering
Biomedical Image Processing
Engineering and Technology
Research Areas Based on Academic Activities
Avesis Research Areas
WoS Research Areas
Scopus Research Areas
Academic Positions
2025 - Present
2025 - PresentProfessor
Akdeniz University, Faculty Of Engineering, Department Of Biomedical Engineering
2018 - 2025
2018 - 2025Associate Professor
Akdeniz University, Faculty Of Engineering, Department Of Biomedical Engineering
2015 - 2018
2015 - 2018Assistant Professor
Akdeniz University, Faculty of Engineering, Department of Computer Engineering
Articles
All (36)
SCI-E, SSCI, AHCI (30)
SCI-E, SSCI, AHCI, ESCI (31)
ESCI (1)
Scopus (30)
TRDizin (3)
Other Publications (3)
2026
20261. CFATrans: Brain tumor segmentation from MRIs using Consecutive Fusion-Attention transformer with convolutional networks and a composite loss function
GÖÇERİ E., Winter Y. D.
Biomedical Signal Processing and Control
, vol.112, 2026 (SCI-Expanded, Scopus)
2026
20262. Lung Cancer Classification Using Effective Fusion Network Integrating Transformers and Controllable Convolutional Encoders–Decoders
GÖÇERİ E.
Journal of Imaging Informatics in Medicine
, 2026 (SCI-Expanded, Scopus)
2025
20253. BRMSA-Net: Disclosing concealed colorectal polyps in colonoscopy images via Boundary Recalibration and Multi-Scale Aggregation Network
Sebai M., GÖÇERİ E.
Biomedical Signal Processing and Control
, vol.110, 2025 (SCI-Expanded)
2025
20254. A convolution and transformer-based method with effective stain normalization for breast cancer detection from whole slide images
GÖÇERİ E.
Biomedical Signal Processing and Control
, vol.110, 2025 (SCI-Expanded, Scopus)
2025
20255. A hybrid attention-based deep learning model for segmentation of livers and liver tumors from CT scans
GÖÇERİ E.
Multimedia Tools and Applications
, vol.84, no.37, pp.46191-46212, 2025 (SCI-Expanded, Scopus)
2025
20256. An efficient network with CNN and transformer blocks for glioma grading and brain tumor classification from MRIs
GÖÇERİ E.
Expert Systems with Applications
, vol.268, 2025 (SCI-Expanded, Scopus)
2024
20247. A comprehensive investigation of multimodal deep learning fusion strategies for breast cancer classification
Nakach F., Idri A., GÖÇERİ E.
Artificial Intelligence Review
, vol.57, no.12, 2024 (SCI-Expanded, Scopus)
2024
20248. GAN based augmentation using a hybrid loss function for dermoscopy images
Göçeri E.
Artificial Intelligence Review
, vol.57, no.9, 2024 (SCI-Expanded, Scopus)
2024
20249. Vision transformer based classification of gliomas from histopathological images
GÖÇERİ E.
Expert Systems with Applications
, vol.241, 2024 (SCI-Expanded)
2024
202410. Nuclei segmentation using attention aware and adversarial networks
GÖÇERİ E.
Neurocomputing
, vol.579, 2024 (SCI-Expanded)
2024
202411. Exploring data mining and machine learning in gynecologic oncology
Idlahcen F., Idri A., GÖÇERİ E.
Artificial Intelligence Review
, vol.57, no.2, 2024 (SCI-Expanded)
2024
202412. Polyp segmentation using a hybrid vision transformer and a hybrid loss function
Göçeri E.
JOURNAL OF IMAGING INFORMATICS IN MEDICINE , vol.37, pp.851-863, 2024 (SCI-Expanded)
2023
202313. Medical image data augmentation: techniques, comparisons and interpretations
GÖÇERİ E.
Artificial Intelligence Review
, vol.56, no.11, pp.12561-12605, 2023 (SCI-Expanded, Scopus)
2023
202314. Comparison of the impacts of dermoscopy image augmentation methods on skin cancer classification and a new augmentation method with wavelet packets
GÖÇERİ E.
International Journal of Imaging Systems and Technology
, vol.33, no.5, pp.1727-1744, 2023 (SCI-Expanded, Scopus)
2023
202315. Classification of skin cancer using adjustable and fully convolutional capsule layers
GÖÇERİ E.
Biomedical Signal Processing and Control
, vol.85, 2023 (SCI-Expanded)
2023
202316. Evaluation of denoising techniques to remove speckle and Gaussian noise from dermoscopy images
GÖÇERİ E.
Computers in Biology and Medicine
, vol.152, 2023 (SCI-Expanded, Scopus)
2021
202117. An Application for Automated Diagnosis of Facial Dermatological Diseases
GÖÇERİ E.
Izmir Katip Celebi University Faculty of Health Science Journal , vol.6, no.3, pp.91-99, 2021 (Peer-Reviewed Journal)
2021
202118. Diagnosis of skin diseases in the era of deep learning and mobile technology
GÖÇERİ E.
COMPUTERS IN BIOLOGY AND MEDICINE
, vol.134, 2021 (SCI-Expanded)
2021
202119. Deep learning based classification of facial dermatological disorders
GÖÇERİ E.
COMPUTERS IN BIOLOGY AND MEDICINE
, vol.128, 2021 (SCI-Expanded)
2020
202020. CapsNet topology to classify tumours from brain images and comparative evaluation
GÖÇERİ E.
IET IMAGE PROCESSING
, vol.14, no.5, pp.882-889, 2020 (SCI-Expanded)
2019
201921. Diagnosis of Alzheimer's disease with Sobolev gradient-based optimization and 3D convolutional neural network
GÖÇERİ E.
INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING
, vol.35, no.7, 2019 (SCI-Expanded)
2018
201822. A method for liver segmentation in perfusion MR images using probabilistic atlases and viscous reconstruction
Dura E., Domingo J., GÖÇERİ E., Marti-Bonmati L.
PATTERN ANALYSIS AND APPLICATIONS
, vol.21, no.4, pp.1083-1095, 2018 (SCI-Expanded)
2018
201823. Fully Automated and Adaptive Intensity Normalization Using Statistical Features for Brain MR Images
GÖÇERİ E.
Celal Bayar Üniversitesi Fen Bilimleri Dergisi
, vol.14, pp.125-134, 2018 (Peer-Reviewed Journal)
2018
201824. Automated Detection of Facial Disorders (ADFD): a novel approach based-on digital photographs
GÖÇERİ E., GÜNAY M.
COMPUTER METHODS IN BIOMECHANICS AND BIOMEDICAL ENGINEERING-IMAGING AND VISUALIZATION
, vol.6, no.6, pp.607-617, 2018 (ESCI)
2017
201725. Advances in Digital Pathology
GÖÇERİ E.
International Journal of Emerging Trends in Health Sciences
, vol.1, no.2, pp.49-55, 2017 (Peer-Reviewed Journal)
2017
201726. Quantitative validation of anti-PTBP1 antibody for diagnostic neuropathology use: Image analysis approach
GÖÇERİ E., Goksel B., Elder J. B., Puduvalli V. K., Otero J. J., Gurcan M. N.
INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING
, vol.33, no.11, 2017 (SCI-Expanded, Scopus)
2017
201727. MR Kafa Görüntülerinden Otomatik Kafatası, Doku ve Lezyon Bölütlemesi: Olasılıksal ve Kararlı Bir Yaklaşım
GÖÇERİ E., GÜNAY M., ŞENOL A. U.
Süleyman Demirel Üniversitesi Fen Bilimleri Dergisi , vol.1, no.1, pp.1, 2017 (Peer-Reviewed Journal)
2017
201728. Vessel segmentation from abdominal magnetic resonance images: adaptive and reconstructive approach
Goceri E., Shah Z. K., Gurcan M. N.
INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING
, vol.33, no.4, 2017 (SCI-Expanded, Scopus)
2017
201729. Automated fluorescent miscroscopic image analysis of PTBP1 expression in glioma
Kaya B., GÖÇERİ E., Becker A., Elder B., Puduvalli V., Winter J., et al.
PLOS ONE
, vol.12, no.3, 2017 (SCI-Expanded, Scopus)
2017
201730. Probabilistic liver atlas construction
Dura E., Domingo J., Ayala G., Marti-Bonmati L., GÖÇERİ E.
BIOMEDICAL ENGINEERING ONLINE
, vol.16, 2017 (SCI-Expanded, Scopus)
2016
201631. Automatic labeling of portal and hepatic veins from MR images prior to liver transplantation
GÖÇERİ E.
INTERNATIONAL JOURNAL OF COMPUTER ASSISTED RADIOLOGY AND SURGERY
, vol.11, no.12, pp.2153-2161, 2016 (SCI-Expanded, Scopus)
2016
201632. Fully automated liver segmentation using Sobolev gradient-based level set evolution
GÖÇERİ E.
INTERNATIONAL JOURNAL FOR NUMERICAL METHODS IN BIOMEDICAL ENGINEERING
, vol.32, no.11, 2016 (SCI-Expanded, Scopus)
2016
201633. Quantification of liver fat: A comprehensive review
Goceri E., Shah Z. K., Layman R., Jiang X., Gurcan M. N.
COMPUTERS IN BIOLOGY AND MEDICINE
, vol.71, pp.174-189, 2016 (SCI-Expanded)
2015
201534. A comparative performance evaluation of various approaches for liver segmentation from SPIR images
GÖÇERİ E., Ünlü M. Z., Dicle O.
Turkish Journal of Electrical Engineering and Computer Sciences
, vol.23, no.3, pp.741-768, 2015 (SCI-Expanded, Scopus, TRDizin)
2014
201435. Fully automated liver segmentation from SPIR image series
Goceri E., Guercan M. N., DİCLE O.
COMPUTERS IN BIOLOGY AND MEDICINE
, vol.53, pp.265-278, 2014 (SCI-Expanded)
2007
200736. JPEG2000 Standardının Yeni Özelliklerini Destekleyen Bir Görüntü İşleme Uygulaması Geliştirilmesi
GÖÇERİ E., YALDIR A.
PAMUKKALE UNIVERSITY JOURNAL OF ENGINEERING SCIENCES-PAMUKKALE UNIVERSITESI MUHENDISLIK BILIMLERI DERGISI , vol.13, no.3, pp.337-346, 2007 (Peer-Reviewed Journal)
Papers Presented at Peer-Reviewed Scientific Conferences
2021
20211. Analysis of Capsule Networks for Image Classification
GÖÇERİ E.
The 15th International Conference on Computer Graphics, Visualization, Computer Vision and Image Processing (CVGCVIP 2021), 21 - 23 July 2021, pp.53-60, (Full Text)
2021
20212. Capsule Neural Networks in Classification of Skin Lesions
GÖÇERİ E.
The 15th International Conference on Computer Graphics, Visualization, Computer Vision and Image Processing (CVGCVIP 2021), 21 - 23 July 2021, pp.29-36, (Full Text)
2021
20213. Automated Skin Cancer Detection: Where We Are and The Way to The Future
GÖÇERİ E.
44th International Conference on Telecommunications and Signal Processing (TSP), ELECTR NETWORK, 26 - 28 July 2021, pp.48-51, (Full Text)
2020
20204. Image Augmentation for Deep Learning Based Lesion Classification from Skin Images
GÖÇERİ E.
The 4th IEEE International Conference on Image Processing, Applications and Systems (IPAS 2020), Cenova, Italy, 9 - 11 December 2020, pp.144-148, (Full Text)
2020
20205. Convolutional Neural Network Based Desktop Applications to Classify Dermatological Diseases
GÖÇERİ E.
The 4th IEEE International Conference on Image Processing, Applications and Systems (IPAS 2020), Cenova, Italy, 9 - 11 December 2020, pp.138-143, (Full Text)
2020
20206. Comparative Evaluations of CNN Based Networks for Skin Lesion Classification
GÖÇERİ E., AKMAN KARAKAŞ A.
14th International Conference on Computer Graphics, Visualization, Computer Vision and Image Processing (CGVCVIP2020), Zagreb, Croatia, 23 - 25 July 2020, pp.237-242, (Full Text)
2020
20207. Impact of Deep Learning and Smartphone Technologies in Dermatology: Automated Diagnosis
GÖÇERİ E.
10th International Conference on Image Processing Theory, Tools and Applications (IPTA), ELECTR NETWORK, 9 - 12 November 2020, (Full Text)
2019
20198. Skin Disease Diagnosis from Photographs Using Deep Learning
GÖÇERİ E.
VII. Thematic Conference on Computational Vision and Medical Image Processing (VipIMAGE 2019), Porto, Portugal, 16 - 18 October 2019, vol.34, pp.239-246, (Full Text)
2019
20199. Challenges and Recent Solutions for Image Segmentation in the Era of Deep Learning
GÖÇERİ E.
9th International Conference on Image Processing Theory, Tools and Applications (IPTA), İstanbul, Turkey, 6 - 09 November 2019, (Full Text)
2019
201910. Analysis of Deep Networks with Residual Blocks and Different Activation Functions: Classification of Skin Diseases
GÖÇERİ E.
9th International Conference on Image Processing Theory, Tools and Applications (IPTA), İstanbul, Turkey, 6 - 09 November 2019, (Full Text)
2018
201811. On The Importance of Batch Size for Deep Learning
GÖÇERİ E., Gooya A.
Conf. on Mathematics (ICOMATH2018), An Istanbul Meeting for World Mathematicians, Minisymposium on Approximation Theory Minisymposium on Math Education, İstanbul, Turkey, 3 - 06 July 2018, pp.99, (Summary Text)
2018
201812. Comparison of Weighted K-Means Clustering Approaches
GÖÇERİ E., Dura E.
International Conf. on Mathematics (ICOMATH2018), An Istanbul Meeting for World Mathematicians, Minisymposium on Approximation Theory Minisymposium on Math Education, İstanbul, Turkey, 3 - 06 July 2018, pp.98, (Summary Text)
2018
201813. Formulas Behind Deep Learning Success
GÖÇERİ E.
International Conference on Applied Analysis and Mathematical Modeling (ICAAMM2018), İstanbul, Turkey, 20 - 24 June 2018, pp.156, (Summary Text)
2018
201814. A Method for Leukocyte Segmentation Using Modified Gram-Schmidt Orthogonalization and Expectation-Maximization
GÖÇERİ E.
International Conference on Applied Analysis and Mathematical Modeling (ICAAMM2018), İstanbul, Turkey, 20 - 24 June 2018, pp.18, (Summary Text)
2018
201815. Automated Measurement of Changes in Cortical Thickness from MR Images
GÖÇERİ E.
International Conference on Applied Analysis and Mathematical Modeling (ICAAMM2018), İstanbul, Turkey, 20 - 24 June 2018, pp.78, (Summary Text)
2018
201816. Biomedical Information Technology: Image Based Computer Aided Diagnosis Systems
GÖÇERİ E., Songül C.
The 7th International Conference on Advanced Technologies (ICAT’18), Antalya, Turkey, 28 - 30 April 2018, pp.132, (Summary Text)
2018
201817. Mobile Health Technologies for Patients with Mental Illness
GÖÇERİ E., Songül C.
The 7th International Conference on Advanced Technologies (ICAT’18), Antalya, Turkey, 28 - 30 April 2018, pp.146, (Summary Text)
2017
201718. Adaptive Bias Field Correction: Application on Abdominal MR Images
GÖÇERİ E., Dura E., Esteve J. D., GÜNAY M.
6th ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing (VipIMAGE), Porto, Portugal, 18 - 20 October 2017, vol.27, pp.102-110, (Full Text)
2017
201719. Deep Learning in Medical Image Analysis: Recent Advances and Future Trends
GÖÇERİ E., GOCERI N.
Computer Graphics, Visualization, Computer Vision and Image Processing (CGVCVIP2017), Lisbon, Portugal, 20 - 23 July 2017, pp.305-310, (Full Text)
2017
201720. Intensity Normalization in Brain MR Images Using Spatially Varying Distribution Matching
GÖÇERİ E.
11th International Conference on Computer Graphics, Visualization, Computer Vision and Image Processing (CGVCVIP), Lisbon, Portugal, 21 - 23 July 2017, pp.300-304, (Full Text)
2017
201721. Computer-Based Segmentation, Change Detection and Quantification for Lesions in Multiple Sclerosis
GÖÇERİ E., Songul C.
2017 International Conference on Computer Science and Engineering (UBMK), Antalya, Turkey, 5 - 08 October 2017, pp.177-182, (Full Text)
2017
201722. Automated Detection and Extraction of Skull from MR Head Images: Preliminary Results
GÖÇERİ E., Songul C.
2017 International Conference on Computer Science and Engineering (UBMK), Antalya, Turkey, 5 - 08 October 2017, pp.171-176, (Full Text)
2015
201523. Artificial neural network based abdominal organ segmentations: A review
Goceri E., MARTINEZ E.
IEEE 14th International Conference on Machine Learning and Applications, ICMLA 2015, Florida, United States Of America, 9 - 11 December 2015, pp.1191-1194, (Full Text)
2015
201524. Automated detection of adenoviral conjunctivitis disease from facial images using machine learning
GÜNAY M., KUCUKOGLU I., GÖÇERİ E., DANIŞMAN T., ALTURJMAN F.
IEEE 14th International Conference on Machine Learning and Applications, ICMLA 2015, Florida, United States Of America, 9 - 11 December 2015, pp.1204-1209, (Full Text)
2016
201625. Review on Machine Learning Based Lesion Segmentation Methods from Brain MR Images
GÖÇERİ E., Dura E., GÜNAY M.
15th IEEE International Conference on Machine Learning and Applications (ICMLA), California, United States Of America, 18 - 20 December 2016, pp.582-587, (Full Text)
2016
201626. Machine Learning for Optimum CT-Prediction for qPCR
GÜNAY M., GÖÇERİ E., Balasubramaniyan R.
15th IEEE International Conference on Machine Learning and Applications (ICMLA), California, United States Of America, 18 - 20 December 2016, pp.588-592, (Full Text)
2016
201627. Iteratively learning a liver segmentation using probabilistic atlases: preliminary results
Domingo J., Dura E., GÖÇERİ E.
15th IEEE International Conference on Machine Learning and Applications (ICMLA), California, United States Of America, 18 - 20 December 2016, pp.593-598, (Full Text)
2015
201528. A Neural Network Based Kidney Segmentation from MR Images
GÖÇERİ N., GÖÇERİ E.
The 14th IEEE International Conference on Machine Learning and Applications (ICMLA’15), Miami, United States Of America, 9 - 11 December 2015, pp.1195-1198, (Full Text)
2015
201529. Automated Detection of Adenoviral Conjunctivitis Disease from Facial Images using Machine Learning
GÜNAY M., GÖÇERİ E., DANIŞMAN T.
14th IEEE International Conference on Machine Learning and Applications, Miami, United States Of America, 9 - 11 December 2015, pp.1, (Full Text)
2015
201530. Automated Detection of Facial Disorders (ADFD): A Novel Approach Based-on Digital Photographs
GÖÇERİ E., GÜNAY M., Alturjman F.
The 28th International Conference of The Jangjeon Mathematical Society, Antalya, Turkey, 15 - 19 May 2015, pp.126, (Summary Text)
2015
201531. Effects of Chosen Scalar Products on Gradient Descent Algorithms
GÖÇERİ E.
The 28th International Conference of The Jangjeon Mathematical Society (ICJMS 2015), Antalya, Turkey, 15 - 19 May 2015, pp.90, (Full Text)
2013
201332. A Level Set Method with Sobolev Gradient and Haralick Edge Detection
GÖÇERİ E., Dura E.
The 9th World Conference on Information Technology (WCIT 2013), Brüksel, Belgium, 26 - 27 November 2013, pp.5
2012
201233. A Liver Segmentation Method Based on Partial Differential Equation and Signed Pressure Force Function
GÖÇERİ E., Ünlü M., Güzeliş C., Dicle O.
17th National Biomedical Engineering Meeting Proceedings (BIYOMUT 2012), İstanbul, Turkey, 3 - 05 October 2012, pp.237-240
2012
201234. An Automatic Level Set Based Liver Segmentation from MRI Data Sets
Goceri E., UNLU M. Z., GUZELIS C., DICLE O.
3rd International Conference on Image Processing Theory, Tools and Applications (IPTA), İstanbul, Turkey, 15 - 18 October 2012, pp.192-197, (Full Text)
2011
201135. Application of the Histogram Analysis in Radiation Therapy HART: An Open Source Software System
Pyakuryal, A., Pokhrel, D., Gopalakrishnan M., Jang S., Jincong L., GÖÇERİ E., et al.
54th American Association of Physicsts in Medicine (AAPM) Meeting, Vancouver, Canada, 31 July - 04 August 2011, vol.38, no.6, pp.3678-3679, (Full Text)
2011
201136. Automatic Kidney Segmentation Using Gaussian Mixture Model on MRI Sequences
GÖÇERİ E.
International Conference on Electric and Electronics (EEIC 2011), Nanchang, China, 20 - 22 June 2011, pp.23-29, (Full Text)
2011
201137. Expectation Maximization And Gaussian Model Based Segmentation on Histology Slides
GÖÇERİ E.
The International Symposium on Computing in Informatics and Mathematics (ISCIM 2011), Tirana-Durres, Albania, 2 - 04 June 2011, pp.649-656, (Full Text)
2011
201138. PCA Based Bayesian Approach for Automatic Multiple Sclerosis Lesion Detection
GÖÇERİ E.
The International Symposium on Computing in Informatics and Mathematics (ISCIM 2011), Tirana-Durres, Albania, 2 - 04 June 2011, pp.687-694
2010
201039. B-Spline Based MR and CT Image Registration for Pre-operation of Liver Transplantation
GÖÇERİ E.
The International Congress on Applications and Computer Science, (CACS2010), Singapur, Singapore, 4 - 06 December 2010, pp.952-955
2010
201040. Liver Segmentation Techniques in MRI with Performance Analysis of Two Level Set Based Methods and A Novel Segmentation Approach
GÖÇERİ E., Ünlü M.
5th National Biomechanical Congress (with international participation), İzmir, Turkey, 23 - 25 September 2010, pp.53
2010
201041. Interpolation approaches and spline based resampling for MR images
Göçeri E., LOMÉNIE N.
2010 5th International Symposium on Health Informatics and Bioinformatics, HIBIT 2010, Antalya, Turkey, 20 - 22 April 2010, pp.137-143, (Full Text)
2007
200742. Developing an Image Processing Application on Compression and Filtering of Multidimensional Medical Images
Göçeri E., Yaldır K.
10th Integrated Design and Process Technology (IDPT-2007), Antalya, Turkey, 3 - 08 June 2007, pp.36-40, (Full Text)
2007
200743. Sustained Image Quality When Performing Image Processing Tehcniques on Wavelet Compressed Medical Images
GÖÇERİ E., Yaldr A.
Second Annual Yök-Suny Collaboration Symposium, Scientific Collaboration For Sustainable Development, Adana, Turkey, 23 - 25 May 2007, pp.305-311, (Full Text)
2007
200744. Geliştirilmekte Olan Görüntü Sıkıştırma Standardı JPEG2000 ve Eklenen Yeni Özellikleri
GÖÇERİ E., YALDIR A.
Akademik Bilişim, Kütahya, Turkey, 31 January - 02 February 2007, pp.67-72
2007
200745. Geliştirilmekte Olan Görüntü Sıkıştırma Standardı JPEG2000 ve Eklenen Yeni Özellikleri. Akademik Bilişim
GÖÇERİ E., Yaldır K.
Akademik Bilişim, Kütahya, Turkey, 31 January - 02 February 2007, pp.67-72
2007
200746. Çok Boyutlu Görüntüler için JPEG2000 Standardını Destekleyen Görüntü İşleme Uygulaması
Göçeri E., Yaldır K.
Akademik Bilişim, Kütahya, Turkey, 31 January - 02 February 2007, pp.63-66, (Full Text)